Bacillus natto is an aerobic bacterium, which can compete with harmful bacteria for oxygen uptake, making the intestinal tract close to an anaerobic environment and achieving the effect of inhibiting and killing harmful bacteria. Due to the clear physiological and biochemical characteristics of Bacillus natto, its relatively simple genetic manipulation, and its high secretion and expression ability, it can serve as an excellent Bacteria Chassis Cell and be transformed into a microbial cell factory for the production of target products such as drug precursors. CD BioGlyco provides high-quality Bacillus natto engineering services with best-in-class synthetic biology technology.
Global regulation of chassis cells
We optimize chassis cells by adjusting global regulators in chassis cells to reduce the metabolic burden due to heterologous production.
For example, we re-edit the metabolic regulatory network in the strain by knocking out major global transcriptional regulators that block carbon metabolism and selecting Bacillus natto mutants that can utilize a wide range of carbon sources.
Multidimensional regulation of chassis cells
We utilize a weak, knockdown approach of unwanted branches to construct a multi-locus, multi-dimensional co-regulatory strategy that enhances the production status of Bacillus natto and facilitates the persistent and efficient production of desired products by chassis cells.
Among them, we provide clustered regularly interspaced short palindromic repeats (CRISPR)-Cas9 technology based on the application of incision enzymes and homology-directed repair (HDR) is an effective method to realize the modification of large fragments and multilocus regulation of the Bacillus natto genome. Also, this method is more efficient for promoter library creation and screening.
Bacillus natto genome streamlining and optimization
To achieve maximum production efficiency and obtain optimal chassis cells, a large-scale reduction of the genome of the model strain is a good optimization strategy. We improve the efficiency of chassis cell synthesis by knocking out non-essential genes in the heterologous synthesis pathway and the coupling step of Bacillus natto's metabolism.
Bottom-up genome streamlining: The assembly of the basic modules (e.g., genes coding for essential proteins) needed to make up a cell, constituting the smallest biological unit that sustains cell life and viability.
Top-down genome streamlining: Deletion of a large number of non-essential gene portions of the genome to simplify existing cells, leading to chassis cell genome downsizing by the direction of production of the target product.
Certain strain genetic manipulation technologies and methods are effective tools to enhance the optimization process of Bacillus natto chassis cells. At CD BioGlyco, we offer technologies and methods that include, but are not limited to:
Gene exchange methods
Label-free recombination
CRISPR-Cas9 technology
Base editor technology based on the CRISPR/Cas system
Fig.1 Metabolic engineering of Bacillus natto. (CD BioGlyco)
Technology: RNA sequencing (RNA-seq) analysis
Journal: Microbial Cell Factories
IF: 6.4
Published: 2021
Results: Following obtaining the maximum poly-γ-glutamic acid (γ-PGA) yield and highest activity of nattokinase (NK) during fermentation, the author was able to analyze the transcriptome of Bacillus natto during the co-production of γ-PGA and NK. Comparing changes in the expression of genes encoding key enzymes and metabolic pathways related to genetically engineered products in Bacillus natto, the authors discovered that the co-production mechanism of γ-PGA and NK can be summarized based on RNA-seq analysis.
CD BioGlyco provides efficient chassis cell optimization and design, as well as Production Services to clients worldwide. Our experimental protocols are developed by experts with many years of experience in the field, providing professional assistance to our clients' research projects. Please feel free to if you are interested in our services.
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